This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032G28A.1

Chile/1054/2022-11-25
J. Angulo, H. Ramos, E. Fuentes-Luppichini & M. Ferres

Pontificia Universidad Catolica de Chile, Area de biomedicina

Sample details

Collection date
2022-11-25
Sampling location
Chile (Region de la Araucania)
Isolate name
1054

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession S
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX101711.1.S
Submitting group
Date submitted
2026-10-01 09:11:03 UTC
Date released
2026-10-01 09:12:10 UTC
Earliest release date
2026-09-30

Alignment and QC

Length S
1863 (99.4%)
# of SNPs S
120
# of inserted bases S
6
# of deleted bases S
2

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

S

  • T61A
  • G63A
  • G66A
  • G120A
  • A135G
  • T202C
  • A219G
  • T225C
  • T244C
  • T306C
  • A312G
  • A318G
  • G330A
  • T354G
  • G378A
  • C417T
  • C444A
  • G450A
Deletions

S

1443, 1573
Insertions

S

ins_1486:T, ins_1555:A, ins_1631:TTT, ins_1668:T

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

N

  • N:L7I

NSs

  • NSs:Q5R
  • NSs:E33G
  • NSs:L35S
  • NSs:I62T
Deletions
N/A
Insertions
N/A

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