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LOC_032G20S.1
Download
Download FASTA
Download metadata TSV
Chile/1242/2013-06-15
J. Angulo,
H. Ramos,
E. Fuentes-Luppichini,
P. Vial &
M. Ferres
Pontificia Universidad Catolica de Chile, Area de biomedicina
Sample details
Collection date
2013-06-15
Sampling location
Chile (Region de Los Rios)
Isolate name
1242
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
INSDC accession L
PX098503.1
INSDC accession M
PX098500.1
INSDC accession S
PX098497.1
NCBI release date
2026-09-30
Host
Host
human (Homo sapiens)
Submission details
Submission ID
PX098503.1.L/PX098500.1.M/PX098497.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-10-01 09:11:03 UTC
Date released
2026-10-01 09:12:10 UTC
Earliest release date
2026-09-30
Alignment and QC
Length L
6554 (99.9%)
# of SNPs L
376
Length M
3653 (99.5%)
# of SNPs M
214
# of inserted bases M
1
Length S
1864 (99.4%)
# of SNPs S
127
# of inserted bases S
6
# of deleted bases S
2
Nucleotide mutations
Mutations called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
L
T
47
C
C
74
T
C
131
T
C
146
T
C
147
T
G
149
A
C
155
T
C
173
T
T
182
C
T
215
C
A
218
G
A
233
C
T
278
C
A
296
G
T
297
C
A
302
G
T
326
C
T
329
C
Show more
M
G
45
A
T
74
C
T
90
C
G
114
A
C
147
T
C
174
T
C
190
T
A
192
G
C
231
T
C
243
T
A
264
G
T
282
C
T
312
C
C
315
T
G
339
C
T
345
C
A
360
G
T
363
C
Show more
S
T
61
A
G
63
A
G
66
A
G
120
A
A
135
G
T
202
C
A
219
G
T
225
C
T
244
C
T
306
C
A
312
G
A
318
G
G
330
A
T
354
G
G
378
A
C
417
T
T
435
C
C
444
A
Show more
Deletions
S
1443, 1573
Insertions
M
ins_3575:T
S
ins_1482:C, ins_1555:A, ins_1631:TTT, ins_1668:T
Amino acid substitutions
Substitutions called relative to the
NC_003468.2
,
NC_003467.2
&
NC_003466.1
references
Substitutions
RdRp
RdRp:
T
141
I
RdRp:
R
144
K
RdRp:
P
149
S
RdRp:
L
277
S
RdRp:
S
338
A
RdRp:
R
346
K
RdRp:
I
402
V
RdRp:
A
541
V
RdRp:
D
780
N
RdRp:
N
1033
D
RdRp:
D
1303
E
RdRp:
V
1665
I
RdRp:
K
1750
R
RdRp:
D
2106
G
RdRp:
T
2113
A
GPC
GPC:
V
8
A
GPC:
I
114
V
GPC:
H
294
Y
GPC:
V
346
I
GPC:
T
353
V
GPC:
I
537
V
GPC:
K
614
R
GPC:
T
1023
A
GPC:
S
1055
T
GPC:
V
1127
I
Gn
Gn:
V
8
A
Gn:
I
114
V
Gn:
H
294
Y
Gn:
V
346
I
Gn:
T
353
V
Gn:
I
537
V
Gn:
K
614
R
Gc
Gc:
T
372
A
Gc:
S
404
T
Gc:
V
476
I
N
N:
L
7
I
NSs
NSs:
Q
5
R
NSs:
E
33
G
NSs:
L
35
S
NSs:
I
62
T
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Reference-aligned nucleotide sequences
Reference-aligned amino acid sequences
L
M
S
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