This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032G1YW.1

Chile/Patient_1060/2023-03-31
J. Angulo, H. Ramos, E. Fuentes-Luppichini & M. Ferres

Pontificia Universidad Catolica de Chile, Area de Biomedicina

Sample details

Collection date
2023-03-31
Sampling location
Chile (Region del Biobio)
Isolate name
Patient_1060

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX111618.1.L
Submitting group
Date submitted
2026-10-01 09:11:03 UTC
Date released
2026-10-01 09:12:10 UTC
Earliest release date
2026-09-30

Alignment and QC

Length L
6546 (99.8%)
# of SNPs L
438

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T47C
  • T68C
  • C74T
  • C131T
  • C146T
  • G149A
  • C155T
  • A200G
  • A212G
  • C219T
  • T227C
  • G266A
  • T269C
  • A296C
  • T297C
  • A302G
  • C305T
  • T308C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

RdRp

  • RdRp:T141I
  • RdRp:N266S
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:A541V
  • RdRp:A845S
  • RdRp:E1032K
  • RdRp:N1033D
  • RdRp:D1303E
  • RdRp:S1440N
  • RdRp:R1603K
  • RdRp:D2106E
  • RdRp:T2113A
Deletions
N/A
Insertions
N/A

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