This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032G0LM.1

Chile/Patient_1239/2013-03-10
J. Angulo, H. Ramos, E. Fuentes-Luppichini, P. Vial & M. Ferres

Pontificia Universidad Catolica de Chile, Area de biomedicina

Sample details

Collection date
2013-03-10
Sampling location
Chile (Region de Los Rios)
Isolate name
Patient_1239

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX111620.1.L
Submitting group
Date submitted
2026-10-01 09:11:03 UTC
Date released
2026-10-01 09:12:10 UTC
Earliest release date
2026-09-30

Alignment and QC

Length L
6553 (99.9%)
# of SNPs L
374

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T47C
  • C74T
  • C131T
  • C146T
  • C147T
  • G149A
  • C155T
  • C173T
  • T182C
  • T215C
  • A218G
  • A233C
  • T278C
  • A296G
  • T297C
  • A302G
  • T326C
  • T329C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

RdRp

  • RdRp:T141I
  • RdRp:R144K
  • RdRp:P149S
  • RdRp:L277S
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:I402V
  • RdRp:A541V
  • RdRp:D780N
  • RdRp:N1033D
  • RdRp:D1303E
  • RdRp:Y1420F
  • RdRp:V1665I
  • RdRp:K1750R
  • RdRp:R1939K
  • RdRp:T2113A
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue