This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032G0E0.1

Chile/Patient_1921/2023-12-28
J. Angulo, H. Ramos, E. Fuentes-Luppichini & M. Ferres

Pontificia Universidad Catolica de Chile, Area de Biomedicina

Sample details

Collection date
2023-12-28
Sampling location
Chile (Region del Libertador General Bernardo O'Higgins)
Isolate name
Patient_1921

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

INSDC accession L
NCBI release date
2026-09-30

Host

Host

Submission details

Submission ID
PX111619.1.L
Submitting group
Date submitted
2026-10-01 09:11:03 UTC
Date released
2026-10-01 09:12:10 UTC
Earliest release date
2026-09-30

Alignment and QC

Length L
6555 (99.9%)
# of SNPs L
832

Nucleotide mutations

Mutations called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

L

  • T47C
  • G71A
  • C74G
  • T77C
  • A95G
  • A116C
  • G119T
  • C128T
  • C131T
  • C137T
  • C146T
  • G149T
  • A167G
  • T182C
  • A198C
  • T216C
  • C219T
  • T227A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_003468.2, NC_003467.2 & NC_003466.1 references

Substitutions

RdRp

  • RdRp:D13E
  • RdRp:I70V
  • RdRp:V135I
  • RdRp:T141I
  • RdRp:R144K
  • RdRp:P149S
  • RdRp:S273T
  • RdRp:L277V
  • RdRp:I321L
  • RdRp:S338A
  • RdRp:R346K
  • RdRp:I402V
  • RdRp:I435V
  • RdRp:N443H
  • RdRp:A491S
  • RdRp:I510V
  • RdRp:V614M
  • RdRp:R683K
Deletions
N/A
Insertions
N/A

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