This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032FZX2.1

USA/MN-MDH-RSVB-04852/2026-06-12
J. Garfin, M. Plumb, K. Pung, A. Mondelli, B. Weber, H. D. Kunerth, D. Evans, L. Bohnker-Voels, M. Anacker, J. Jencks & S. Namugenyi

Minnesota Department of Health Infectious Disease Laboratory Submission Group, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-06-12
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04852

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.4

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-30
NCBI update date
2026-09-30
Raw reads accession

Host

Host

Submission details

Submission ID
QB057342.1
Submitting group
Date submitted
2026-10-01 07:00:31 UTC
Date released
2026-10-01 07:00:50 UTC
Earliest release date
2026-09-30

Alignment and QC

Length
15140 (94.7%)
# of SNPs
143
# of inserted bases
4
# of deleted bases
2
# of unknown bases
720

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • T483C
  • G513T
  • G579A
  • T592C
  • G618A
  • A827G
  • T835C
  • C1018T
  • G1138A
  • G1732A
  • G1768A
  • T1846C
  • C2198T
  • T2346C
  • C2484T
  • C2521T
  • C2554T
  • C2691T
Deletions
973, 4586
Insertions
ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:A107T
  • G:T131A
  • G:I137T
  • G:P214S
  • G:L217P
  • G:P221L
  • G:I252T
  • G:S265P
  • G:I268T
  • G:S275P
  • G:L284I
  • G:Y285H
  • G:P289S

L

  • L:S169P
  • L:A1238V
  • L:R1759K
  • L:A1927V
  • L:T1987I

M2-1

  • M2-1:I125V
  • M2-1:E178D

M2-2

  • M2-2:I2T
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

NS2

  • NS2:R12K
  • NS2:T82A

P

  • P:P73S
Deletions
N/A
Insertions
N/A

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