This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032FZW4.1

USA/MN-MDH-RSVB-04851/2026-06-14
J. Garfin, M. Plumb, K. Pung, A. Mondelli, B. Weber, H. D. Kunerth, D. Evans, L. Bohnker-Voels, M. Anacker, J. Jencks & S. Namugenyi

Minnesota Department of Health Infectious Disease Laboratory Submission Group, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-06-14
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-04851

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
B.D.E.1

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-30
NCBI update date
2026-09-30
Raw reads accession

Host

Host

Submission details

Submission ID
QB057341.1
Submitting group
Date submitted
2026-10-01 07:00:31 UTC
Date released
2026-10-01 07:00:50 UTC
Earliest release date
2026-09-30

Alignment and QC

Length
15140 (94.8%)
# of SNPs
146
# of inserted bases
4
# of deleted bases
2
# of unknown bases
706

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions
  • A49G
  • T498C
  • G513T
  • G579A
  • T808C
  • C998A
  • C1015T
  • C1672T
  • G1732A
  • T1846C
  • C2074T
  • C2198T
  • C2287T
  • C2365T
  • C2554T
  • C2579T
  • C2691T
  • G2982A
Deletions
973, 4586
Insertions
ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:S100G
  • G:T106I
  • G:P214S
  • G:P221L
  • G:P235S
  • G:I252T
  • G:K256N
  • G:I268T
  • G:S275P
  • G:Y285H
  • G:S295F

L

  • L:E165G
  • L:V179A
  • L:K570R
  • L:L1031I
  • L:M1741L
  • L:R1759K
  • L:T1987I

M2-2

  • M2-2:I2T
  • M2-2:E25K
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F
  • M2-2:K63R
  • M2-2:T69A

P

  • P:T92I
Deletions
N/A
Insertions
N/A

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