This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_032DLSV.1

USA/V26005326/2026-05-12
A. Hassan & B. Cherrelle

NJDOH PHEL Virology Shared Submissions, Public Health and Environmental Laboratories, Virology

Sample details

Collection date
2026-05-12
Sampling location
USA (New Jersey)
Isolate name
V26005326

Data use terms

Data use terms
OPEN
Data use terms URL

Lineage

Lineage
A.D.3.3

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-08-10
NCBI update date
2026-08-10

Host

Host

Submission details

Submission ID
PZ777362.1
Submitting group
Date submitted
2026-09-29 19:02:57 UTC
Date released
2026-09-29 19:20:54 UTC
Earliest release date
2026-08-10

Alignment and QC

Length
15232 (100%)
# of SNPs
221
# of inserted bases
12
# of ambiguous bases
1

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions
  • T59C
  • T66A
  • A67G
  • A68G
  • G74A
  • C90T
  • C183T
  • A354G
  • G587T
  • C1012T
  • G1034A
  • G1050A
  • G1077A
  • T1088A
  • T1137C
  • T1218C
  • T1326C
  • T1359C
Deletions
N/A
Insertions
ins_0:ACAAACTTGC, ins_15115:TT

Amino acid substitutions

Substitutions called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I

G

  • G:L23M
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:V131D
  • G:I134K
  • G:N178G
  • G:K204N
  • G:G224E
  • G:G232E
  • G:S243I
  • G:N255D
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L
  • G:E271K

L

  • L:P171L
  • L:K180R
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D

M2-1

  • M2-1:P120L
  • M2-1:S176P

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:H45Y
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:G2D

P

  • P:L55P
  • P:T92M
  • P:S215P
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue