This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XVFGV.1

Guinea/EBO-0003/2021
A. K. Keita, F. R. Koundouno, M. Faye, A. Dux, J. Hinzmann, H. Diallo, A. Ayouba, F. Le Marcis, B. Soropogui, K. Ifono, M. M. Diagne, M. S. Sow, J. A. Bore, S. Calvignac-Spencer, N. Vidal, J. Camara, M. B. Keita, A. Renevey, A. Diallo, A. K. Soumah, S. L. Millimono, A. Mari-Saez, M. Diop, A. Dore, ..., K. Prieto

Institut Pasteur de Dakar, Virology Department

Sample details

Collection date
2021
Sampling location
Guinea (Nzerekore)
Isolate name
EBO-0003

Data use terms

Data use terms
OPEN
Data use terms URL

Outbreak

Outbreak
Ebov-2013/r2021

INSDC

INSDC accession
NCBI release date
2021-09-08
NCBI update date
2021-10-01

Host

Host

Submission details

Submission ID
MZ605321.1
Submitting group
Date submitted
2026-09-29 18:59:58 UTC
Date released
2026-09-29 19:02:19 UTC
Earliest release date
2021-09-08

Alignment and QC

Length
18886 (99.6%)
# of SNPs
577

Nucleotide mutations

Mutations called relative to the NC_002549.1 reference

Substitutions
  • C127T
  • C149T
  • A155C
  • A182G
  • A187G
  • C230T
  • T236C
  • A257G
  • C261T
  • G263A
  • A295C
  • C356T
  • G360A
  • T369C
  • T377C
  • T378C
  • G381A
  • T385C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_002549.1 reference

Substitutions

NP

  • NP:I8V
  • NP:A11T
  • NP:R111C
  • NP:K128R
  • NP:S465G
  • NP:N478S
  • NP:I517T
  • NP:R525T
  • NP:I527T
  • NP:P531T
  • NP:H534R
  • NP:T631I
  • NP:Q637R
  • NP:S644P
  • NP:E708D
  • NP:K728R

VP35

  • VP35:A12V
  • VP35:S41N
  • VP35:T68M
  • VP35:N204D

VP40

  • VP40:V20A
  • VP40:I324V

GP

  • GP:A82V
  • GP:T262A
  • GP:V310A
  • GP:A315P
  • GP:G331E
  • GP:T336N
  • GP:E359K
  • GP:S377P
  • GP:L378P
  • GP:P382T
  • GP:E405G
  • GP:T411A
  • GP:S422P
  • GP:P430L
  • GP:T441A
  • GP:F443S
  • GP:P446L
  • GP:H455Y
  • GP:A503V
  • GP:I544T

ssGP

  • ssGP:A82V
  • ssGP:T262A

sGP

  • sGP:A82V
  • sGP:T262A
  • sGP:E314D
  • sGP:G331R
  • sGP:L336M

VP24

  • VP24:M212K

L

  • L:V79I
  • L:E130D
  • L:F150L
  • L:M197L
  • L:A215T
  • L:I259V
  • L:M337I
  • L:Q346H
  • L:D692N
  • L:D759G
  • L:L888S
  • L:F1142V
  • L:I1240T
  • L:S1383N
  • L:R1405Q
  • L:Y1594H
  • L:Q1607H
  • L:S1615N
Deletions
N/A
Insertions
N/A

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