This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XFTSR.1

Democratic_Republic_of_the_Congo/LOC_02XFTSR.1/2026-01-01
B. La Rosa, E. LaVerriere, S. Behar, L. Mackay, M. Seyler-Schmidt, J. H. Connor & R. Davey

Boston University/NEIDL, Boston, Massachusetts

Sample details

Collection date
2026-01-01
Sampling location
Democratic Republic of the Congo
Isolate name
Democratic_Republic_of_the_Congo/26FHV045/2026-05-03/R

Data use terms

Data use terms
OPEN
Data use terms URL

Outbreak

Outbreak
Bdbv-2026

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-09-05
NCBI update date
2026-09-06

Submission details

Submission ID
OZ542751.1
Submitting group
Date submitted
2026-09-29 18:59:51 UTC
Date released
2026-09-29 19:00:02 UTC
Earliest release date
2026-09-05

Alignment and QC

Length
18921 (99.9%)
# of SNPs
216
# of inserted bases
1
# of unknown bases
1

Nucleotide mutations

Mutations called relative to the NC_014373.1 reference

Substitutions
  • C135T
  • C261T
  • A266G
  • C530T
  • T586C
  • G832A
  • C1018T
  • A1066G
  • T1375C
  • T1405C
  • C1675A
  • C1702T
  • T1774G
  • G1924A
  • A1943G
  • A1954G
  • A2007G
  • G2027A
Deletions
N/A
Insertions
ins_18902:A

Amino acid substitutions

Substitutions called relative to the NC_014373.1 reference

Substitutions

NP

  • NP:N496D
  • NP:Q517R
  • NP:G524S
  • NP:V531A
  • NP:R537K
  • NP:V544I
  • NP:D546N
  • NP:A569V

VP35

  • VP35:N79S
  • VP35:G187E
  • VP35:M192I

VP40

  • VP40:I14M
  • VP40:A31S

GP

  • GP:Y151F
  • GP:E188K
  • GP:P365S
  • GP:P367L
  • GP:Y387H
  • GP:P389L
  • GP:R394G
  • GP:T458I
  • GP:P481L
  • GP:T486I
  • GP:A489V
  • GP:R506S

GP_003

  • GP_003:Y151F
  • GP_003:E188K
  • GP_003:T320I
  • GP_003:P328L
  • GP_003:Q367*

VP30

  • VP30:H5Y

VP24

  • VP24:S24N

L

  • L:V402I
  • L:L1011F
  • L:S1323A
  • L:N1342H
  • L:K1570R
  • L:L1595Q
  • L:I1664R
  • L:K1738N
  • L:Q1770R
  • L:N1771D
  • L:I1784V
  • L:R1954G
  • L:E1969D
  • L:A2191V
Deletions
N/A
Insertions
N/A

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