This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XF5JV.1

India/LOC_02XF5JV.1/2024-06-22
K. S. Santhosh, T. G. Puneeth, K. Mallikarjun, K. Gudadappa & K. C. Siddesh

Shimoga Institute of Medical Sciences, Department of Microbiology

Sample details

Collection date
2024-06-22
Sampling location
India
Isolate name
SIMS-VRDL 2401756

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2024-10-13
NCBI update date
2024-10-13

Host

Host

Submission details

Submission ID
PQ426626.1
Submitting group
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:01:10 UTC
Earliest release date
2024-10-13

Alignment and QC

Length
817 (7.56%)
# of SNPs
13

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • C1616T
  • G1656A
  • T1787C
  • G1815A
  • G1826A
  • T1871C
  • C1904A
  • A1967G
  • T2030C
  • C2066T
  • A2304C
  • G2306A
  • C2309G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

E

  • E:A227T
  • E:A280T
  • E:K443Q
Deletions
N/A
Insertions
N/A

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