This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Organisms
Zika Virus
SeqSets
Login
Loculus
Organisms
Andes Virus [Hantavirus]
CCHF (Multi-Ref)
Chikungunya Virus
Crimean-Congo Hemorrhagic Fever Virus
Dengue Virus
Ebola Bundibugyo
Ebola Sudan
Ebola Zaire
Enterovirus
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
SARS-CoV-2
West Nile Virus
Yellow Fever Virus
Zika Virus
SeqSets
Login
Docs
API docs
Zika Virus
|
Browse data
Submit sequences
Select organism section
Browse data
Submit sequences
LOC_02XF2SG.1
Download
Download FASTA
Download metadata TSV
Singapore/5H_alb1/2023-06
J. C. C. Wong,
M. Tay,
H. C. Hapuarachchi,
B. Lee,
G. Yeo,
D. Maliki,
W. Lee,
N. A. M. Suhaime,
K. Chio,
W. C. H. Tan &
L. C. Ng
National Environment Agency, Environmental Health Institute
Sample details
Collection date
2023-06
Sampling location
Singapore
Isolate name
5H_alb1
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
Clade
Clade
Asian
INSDC
INSDC accession
PP130174.1
NCBI release date
2024-02-03
NCBI update date
2024-02-03
Host
Host
Asian tiger mosquito; forest day mosquito (Aedes albopictus)
Submission details
Submission ID
PP130174.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:01:10 UTC
Earliest release date
2024-02-03
Alignment and QC
Length
1512 (14%)
# of SNPs
42
Nucleotide mutations
Mutations called relative to the
NC_035889.1
reference
Substitutions
G
983
A
T
1050
C
C
1070
T
G
1109
A
A
1175
G
C
1178
T
A
1214
G
A
1232
G
C
1304
A
C
1505
T
T
1523
C
T
1565
A
T
1578
C
T
1587
C
T
1592
C
C
1616
T
C
1637
T
C
1655
T
Show more
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_035889.1
reference
Substitutions
E
E:
M
473
V
E:
M
487
T
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Reference-aligned nucleotide sequence
Reference-aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue