This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XF0PQ.1

Thailand/AB4440/2023-02-14
S. Khongwichit, W. Chuchaona, S. Vongpunsawad & Y. Poovorawan

Chulalongkorn University, Pediatrics, Faculty of Medicine

Sample details

Collection date
2023-02-14
Sampling location
Thailand
Isolate name
AB4440

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
Asian

INSDC

INSDC accession
NCBI release date
2023-11-02
NCBI update date
2023-11-02

Host

Host

Submission details

Submission ID
OR264640.1
Submitting group
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:01:10 UTC
Earliest release date
2023-11-02

Alignment and QC

Length
10602 (98.1%)
# of SNPs
159

Nucleotide mutations

Mutations called relative to the NC_035889.1 reference

Substitutions
  • T227C
  • A254G
  • A272G
  • T434C
  • A523G
  • T558C
  • G653A
  • T746C
  • C786T
  • A803G
  • A815G
  • T837C
  • T934C
  • G945A
  • T1115C
  • T1241C
  • C1304A
  • T1328C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_035889.1 reference

Substitutions

prM

  • prM:N17S
  • prM:V154A
  • prM:V158I

pr

  • pr:N17S

M

  • M:V61A
  • M:V65I

NS1

  • NS1:V93I
  • NS1:N95S
  • NS1:E146K
  • NS1:A233T
  • NS1:V349M

NS3

  • NS3:H584Y

NS4B

  • NS4B:I240T

NS5

  • NS5:V114M
  • NS5:M883I
Deletions
N/A
Insertions
N/A

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