This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XEHXT.1

YFV/Bolivia/YFV_2408/2026-04-14
J. A. Chuquimia Valdez, V. Fonseca, C. Orellana Mendoza, N. Guimaraes, S. Sasias Martinez, M. Giovanetti, L. C. Junior Alcantara & L. R. Loayza Mafayle

Universidade do Estado da Bahia, DCET-1

Sample details

Collection date
2026-04-14
Sampling location
Bolivia (Santa Cruz, Cordillera, Charagua)
Isolate name
YFV_2408

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
VI

INSDC

INSDC accession
NCBI release date
2026-09-28
NCBI update date
2026-09-28

Host

Host

Submission details

Submission ID
PZ671926.1
Submitting group
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:03:48 UTC
Earliest release date
2026-09-28

Alignment and QC

Length
10225 (85.9%)
# of SNPs
1399
# of unknown bases
891

Nucleotide mutations

Mutations called relative to the NC_002031.1 reference

Substitutions
  • A166T
  • T178C
  • A192G
  • A225G
  • C226T
  • T247C
  • A260G
  • C262T
  • A281G
  • A295G
  • C301T
  • A304T
  • C307T
  • C310T
  • A313G
  • G318A
  • G319A
  • T320C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_002031.1 reference

Substitutions

C

  • C:N25S
  • C:N36S
  • C:I48V
  • C:I55V
  • C:R67K
  • C:K70R
  • C:A79V

prM

  • prM:K6R
  • prM:F125L
  • prM:V133A
  • prM:T137A

M

  • M:F36L
  • M:V44A
  • M:T48A

E

  • E:R52G
  • E:V56A
  • E:N62S
  • E:H67N
  • E:A83E
  • E:V170A
  • E:I173T
  • E:K177R
  • E:G191S
  • E:T200K
  • E:R207K
  • E:R243K
  • E:D270N
  • E:N271S
  • E:N272K
  • E:Y274N
  • E:S282A
  • E:I299M

NS1

  • NS1:I21V
  • NS1:F79L
  • NS1:P93S
  • NS1:V96I
  • NS1:I177M
  • NS1:A218T
  • NS1:E240D
  • NS1:I286V
  • NS1:I287V
  • NS1:N290G
  • NS1:V307I
  • NS1:R338K
  • NS1:E342D

NS2a

  • NS2a:V6I
  • NS2a:M30I
  • NS2a:V35M
  • NS2a:L48I
  • NS2a:V118M
  • NS2a:T147V
  • NS2a:A167T
  • NS2a:F169L
  • NS2a:A172T
  • NS2a:F183S
  • NS2a:L216M
  • NS2a:I220V

NS2b

  • NS2b:I32V
  • NS2b:L37I
  • NS2b:K54R
  • NS2b:A77T

NS3

  • NS3:I68V
  • NS3:V103A
  • NS3:V195I
  • NS3:R259K
  • NS3:K535R
  • NS3:S613A
  • NS3:E614D

NS4a

  • NS4a:V5M
  • NS4a:M24V
  • NS4a:F30L
  • NS4a:I53T
  • NS4a:I58V
  • NS4a:M67V
  • NS4a:V107I
  • NS4a:I119V

2K

  • 2K:S1T
  • 2K:V18I
  • 2K:A20V

NS4b

  • NS4b:S25A
  • NS4b:L32F
  • NS4b:M95I
  • NS4b:S121T
  • NS4b:E145K
  • NS4b:H232Y

RdRPol

  • RdRPol:S2R
  • RdRPol:R22Q
  • RdRPol:I78T
  • RdRPol:K95R
  • RdRPol:R107K
  • RdRPol:D108E
  • RdRPol:I132V
  • RdRPol:V138T
  • RdRPol:S152P
  • RdRPol:V162M
  • RdRPol:A173G
  • RdRPol:D177E
  • RdRPol:N178S
  • RdRPol:V229I
  • RdRPol:K275R
  • RdRPol:E276A
  • RdRPol:M290T
  • RdRPol:T291A
Deletions
N/A
Insertions
N/A

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