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LOC_02XEHHM.1
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YFV/unknown/LOC_02XEHHM.1/2022-07-25
C. A. Hansen,
S. Rast,
J. K. Thompson,
H. Hao,
D. Jupiter,
S. Higgs,
N. Bourne &
A. D. T. Barrett
University of Texas Medical Branch, Pathology
Sample details
Collection date
2022-07-25
Isolate name
French neurotropic vaccine (NT)
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
Clade
Clade
V
INSDC
INSDC accession
PX766925.1
NCBI release date
2026-06-24
NCBI update date
2026-06-24
Submission details
Submission ID
PX766925.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:03:48 UTC
Earliest release date
2026-06-24
Alignment and QC
Length
10765 (100%)
# of SNPs
175
# of deleted bases
96
Nucleotide mutations
Mutations called relative to the
NC_002031.1
reference
Substitutions
T
247
C
T
275
C
A
304
G
C
337
T
T
357
C
C
370
T
G
373
A
A
386
G
T
455
C
G
554
A
G
556
T
A
562
G
T
596
C
T
844
C
G
883
A
C
1006
T
T
1036
C
T
1042
C
Show more
Deletions
10374-10469
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_002031.1
reference
Substitutions
C
C:
F
53
L
C:
V
80
A
C:
S
90
G
prM
prM:
V
25
I
prM:
Y
39
H
E
E:
R
52
G
E:
A
54
V
E:
V
56
A
E:
R
140
K
E:
A
141
V
E:
N
151
D
E:
D
155
A
E:
I
156
T
E:
V
170
A
E:
I
173
T
E:
T
200
K
E:
N
249
D
E:
I
299
M
E:
F
305
S
E:
S
325
P
E:
R
380
T
E:
T
416
A
NS1
NS1:
F
79
L
NS1:
K
261
R
NS1:
V
307
I
NS1:
K
339
N
NS2a
NS2a:
I
82
V
NS2a:
T
105
A
NS2a:
V
118
M
NS2a:
A
167
T
NS2a:
F
169
L
NS2a:
A
172
T
NS2a:
F
183
S
NS2b
NS2b:
A
11
V
NS2b:
L
37
I
NS2b:
S
60
A
NS2b:
D
95
G
NS2b:
L
109
I
NS2b:
H
124
Y
NS3
NS3:
R
62
W
NS3:
V
103
A
NS3:
M
192
K
NS3:
V
195
I
NS3:
V
280
I
NS3:
N
485
D
NS4a
NS4a:
V
7
A
NS4a:
F
30
L
NS4a:
M
55
L
NS4a:
V
107
I
NS4a:
M
108
L
2K
2K:
Y
9
F
2K:
A
20
L
NS4b
NS4b:
S
23
G
NS4b:
V
98
I
NS4b:
E
145
K
NS4b:
H
232
Y
RdRPol
RdRPol:
D
20
N
RdRPol:
R
22
Q
RdRPol:
I
132
V
RdRPol:
S
152
P
RdRPol:
I
258
T
RdRPol:
R
335
K
RdRPol:
K
431
R
RdRPol:
L
435
M
RdRPol:
F
531
L
RdRPol:
K
660
R
RdRPol:
M
828
I
RdRPol:
K
836
E
RdRPol:
I
878
V
RdRPol:
L
901
P
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Reference-aligned nucleotide sequence
Reference-aligned amino acid sequences
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