This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XE95L.1

YFV/Australia/LOC_02XE95L.1/2023-08
A. Aziz, I. Savic & L. Caly

Melbourne Health, VIDRL

Sample details

Collection date
2023-08
Sampling location
Australia (NSW)
Isolate name
yfv/NSW/1-17D/2023

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
V

INSDC

INSDC accession
NCBI release date
2023-11-08
NCBI update date
2023-11-08

Host

Host

Submission details

Submission ID
OR700702.1
Submitting group
Date submitted
2026-09-29 18:59:49 UTC
Date released
2026-09-29 19:03:48 UTC
Earliest release date
2023-11-08

Alignment and QC

Length
10861 (99.9%)
# of SNPs
8
# of ambiguous bases
5

Nucleotide mutations

Mutations called relative to the NC_002031.1 reference

Substitutions
  • T4054C
  • A5641G
  • C6529T
  • G6758A
  • G7319A
  • G9605A
  • A10243G
  • G10454A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_002031.1 reference

Substitutions

NS4a

  • NS4a:V107I

NS4b

  • NS4b:E145K

RdRPol

  • RdRPol:D657N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue