This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_02XA7MX.1

Uganda/LOC_02XA7MX.1/2014
L. Nyakarahuka, J. Ojwang, A. Tumusiime, S. Balinandi, S. Whitmer, S. Kyazze, S. Kasozi, M. Wetaka, I. Makumbi, M. Dahlke, J. Borchert, J. Lutwama, U. Stroher, P. E. Rollin, S. T. Nichol, T. R. Shoemaker, S. L. M. Whitmer, S. Nichol & U. Stroeher

Viral Special Pathogens Branch, The Centers for Disease Control and Prevention

Sample details

Collection date
2014
Sampling location
Uganda
Isolate name
Marburg virus/H. sapiens-tc/UGA/2014/Kampala-812601

Data use terms

Data use terms
OPEN
Data use terms URL

Clade

Clade
MARV.B.2

INSDC

INSDC accession
NCBI release date
2017-11-17
NCBI update date
2017-11-17

Host

Host

Submission details

Submission ID
KP985768.1
Submitting group
Date submitted
2026-09-29 18:59:45 UTC
Date released
2026-09-29 19:01:04 UTC
Earliest release date
2017-11-17

Alignment and QC

Length
19113 (100%)
# of SNPs
1438
# of inserted bases
2

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions
  • T109C
  • C115T
  • G124A
  • C142T
  • A169G
  • C205T
  • C256T
  • G265A
  • G277T
  • G289A
  • G310A
  • G340A
  • C343T
  • T367C
  • T415C
  • C433T
  • G460A
  • T499C
Deletions
N/A
Insertions
ins_18683:A, ins_18872:G

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference

Substitutions

GP

  • GP:K2R
  • GP:L7F
  • GP:T16I
  • GP:N18T
  • GP:N28D
  • GP:I113V
  • GP:A214T
  • GP:A227T
  • GP:I231T
  • GP:P234S
  • GP:L235P
  • GP:R239H
  • GP:L244P
  • GP:K253R
  • GP:D258N
  • GP:S260N
  • GP:A267T
  • GP:R276Q

L

  • L:I17V
  • L:A115T
  • L:S128P
  • L:V189I
  • L:I214V
  • L:Q282Y
  • L:H335C
  • L:Q342R
  • L:V359I
  • L:S398A
  • L:E536D
  • L:D653N
  • L:E947G
  • L:S957A
  • L:K981R
  • L:R1018K
  • L:R1129K
  • L:E1143K

NP

  • NP:M428V
  • NP:E448G
  • NP:G481S
  • NP:P493S
  • NP:R495G
  • NP:N501D
  • NP:N578S
  • NP:P579S
  • NP:M612A
  • NP:D625Y
  • NP:N654S
  • NP:I660V

VP24

  • VP24:N17K
  • VP24:H48R
  • VP24:V214I

VP30

  • VP30:V15A
  • VP30:T16I
  • VP30:T18S
  • VP30:H30N
  • VP30:Y34H
  • VP30:A48T
  • VP30:A88T
  • VP30:P90L
  • VP30:T121A
  • VP30:R123K
  • VP30:S159N
  • VP30:M201I

VP35

  • VP35:R70K
  • VP35:T94V

VP40

  • VP40:Q37H
  • VP40:V57I
  • VP40:V195I
  • VP40:N269S
  • VP40:V303I
Deletions
N/A
Insertions
N/A

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