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LOC_00K5WPW.1
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Download FASTA
Download metadata TSV
United_Kingdom/LOC_00K5WPW.1/2026-09-09
Sample details
Collection date
2026-09-09
Earliest release date
2026-09-12
Sampling location
United Kingdom
Data use terms
Data use terms
OPEN
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2026-09-12
NCBI update date
2026-09-13
INSDC accession
OZ556527.1
BioProject accession
PRJEB111185
BioSample accession
SAMEA123452352
Host
Host
human (Homo sapiens)
Submission details
Submission ID
OZ556527.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-09-28 21:39:14 UTC
Date released
2026-09-28 22:23:11 UTC
Lineage
Nextstrain clade
recombinant
Pango lineage
XFZ.4.1.2
Alignment and QC
Total SNPs
145
Total deleted nucs
41
Total ambiguous nucs
3
Total unknown nucs
55
Length
29768 (99.5%)
Nucleotide mutations
Mutations called relative to the
MN908947.3
reference
Substitutions
C
241
T
T
394
C
C
475
T
T
670
G
C
897
A
C
920
T
G
1148
T
C
1288
T
C
2790
T
C
3037
T
G
3431
T
T
3565
C
G
4184
A
C
4321
T
C
4999
T
T
5479
C
A
6183
G
C
6255
T
Show more
Deletions
11288-11296, 21992-21994, 22194-22196, 29734-29759
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
MN908947.3
reference
Substitutions
E
E:
T
9
I
M
M:
D
3
H
M:
Q
19
E
M:
A
63
T
M:
A
104
V
N
N:
P
13
L
N:
Q
229
K
N:
S
413
R
ORF1a
ORF1a:
S
135
R
ORF1a:
A
211
D
ORF1a:
G
295
C
ORF1a:
T
842
I
ORF1a:
V
1056
L
ORF1a:
G
1307
S
ORF1a:
K
1973
R
ORF1a:
A
1997
V
ORF1a:
P
2018
S
ORF1a:
A
2128
T
ORF1a:
T
2283
I
ORF1a:
N
2526
S
ORF1a:
A
2710
T
ORF1a:
L
3027
F
ORF1a:
T
3090
I
ORF1a:
T
3255
I
ORF1a:
P
3395
H
ORF1a:
V
3593
F
ORF1a:
R
3821
K
ORF1a:
T
4175
I
ORF1b
ORF1b:
P
314
L
ORF1b:
R
1315
C
ORF1b:
I
1566
V
ORF1b:
T
2163
I
ORF3a
ORF3a:
A
54
S
ORF3a:
T
223
I
ORF6
ORF6:
D
61
L
ORF7b
ORF7b:
F
19
L
ORF9b
ORF9b:
P
3
H
ORF9b:
P
10
S
S
S:
S
31
P
S:
S
50
L
S:
V
127
F
S:
G
142
D
S:
F
157
S
S:
R
158
G
S:
K
182
R
S:
R
190
S
S:
L
212
I
S:
V
213
G
S:
L
216
F
S:
H
245
N
S:
A
264
D
S:
I
332
V
S:
G
339
H
S:
R
346
T
S:
K
356
T
S:
S
371
F
Show more
Deletions
ORF1a
ORF1a:3675-3677
S
S:144, S:211
Insertions
N/A
Nucleotide sequence
Reference-aligned nucleotide sequence
Reference-aligned amino acid sequences
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