This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_008V64M.1

United_Kingdom/LOC_008V64M.1/2026-09-06

Sample details

Collection date
2026-09-06
Earliest release date
2026-09-12
Sampling location
United Kingdom

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-09-12
NCBI update date
2026-09-13
INSDC accession
BioProject accession
BioSample accession

Host

Host

Submission details

Submission ID
OZ556504.1
Submitting group
Date submitted
2026-09-28 21:07:33 UTC
Date released
2026-09-28 21:19:36 UTC

Lineage

Nextstrain clade
25C
Pango lineage
RV.1.3

Alignment and QC

Total SNPs
65
Total deleted nucs
26
Total ambiguous nucs
9
Total unknown nucs
13828
Length
29441 (52.3%)

Nucleotide mutations

Mutations called relative to the MN908947.3 reference

Substitutions
  • T606C
  • T670G
  • G4444A
  • C4901A
  • C5239T
  • G5612A
  • C6525T
  • A7842G
  • C7869T
  • G10447A
  • C10449A
  • G11042T
  • T13339C
  • G13445T
  • C15714T
  • T15756A
  • G15982A
  • C17410T
Deletions
29734-29759
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the MN908947.3 reference

Substitutions

E

  • E:T9I

M

  • M:D3H
  • M:Q19E
  • M:T30A
  • M:A63T
  • M:A104V

N

  • N:P13L
  • N:R203K
  • N:G204R
  • N:Q229K
  • N:I357V
  • N:T379I
  • N:S413R

ORF1a

  • ORF1a:I114T
  • ORF1a:S135R
  • ORF1a:L1546I
  • ORF1a:V1783I
  • ORF1a:T2087I
  • ORF1a:N2526S
  • ORF1a:S2535L
  • ORF1a:P3395H
  • ORF1a:V3593F
  • ORF1a:A4394S

ORF1b

  • ORF1b:V839I
  • ORF1b:R1315C

ORF3a

  • ORF3a:T223I

ORF6

  • ORF6:D61L

ORF7b

  • ORF7b:F19L

ORF9b

  • ORF9b:I5T
  • ORF9b:P10S

S

  • S:V213G
  • S:L216F
  • S:H245N
  • S:A264D
  • S:E554K
  • S:A570V
  • S:T572I
  • S:D614G
  • S:P621S
  • S:T678I
  • S:N679K
  • S:P681R
  • S:N764K
  • S:I794V
  • S:D796Y
  • S:N969K
Deletions
N/A
Insertions
N/A

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